Peer-Reviewed Publications
As listed in [PubMed |
Scopus |
ResearcherID]
To appear
- Chen WM, Manichaikul A, Rich SS.
Identifying variants that contribute to linkage for dichotomous and quantitative traits in
extended pedigrees. BMC Proceedings, to appear
- Manichaikul A, Chen WM, Williams K, Wong Q, Sale MM,
Pankow JS, Tsai MY, Rotter JI, Rich SS, Mychaleckyj JC.
Analysis of family- and population-based samples in cohort genome-wide
association studies.
Human Genetics, to appear
[Pubmed]
- Manichaikul A, Wang Q, Shi YL, Zhang Z, Leitinger N, Shi W.
Characterization of Ath29, a major mouse atherosclerosis
susceptibility locus, and identification of Rcn2 as a novel regulator
of cytokine expression.
Am J Physiol Heart
Circ Physiol, to appear
[Pubmed]
2011
- Lemaitre RN, Tanaka T, Tang W, Manichaikul A, Foy M,
Kabagambe EK, Nettleton JA, King IB, Weng LC, Bhattacharya S,
Bandinelli S, Bis JC, Rich SS, Jacobs DR Jr., Cherubini A, McKnight B,
Liang S, Gu X, Rice K, Laurie CC, Lumley T, Browning BL, Psaty BM,
Chen YDI, Friedlander Y, Djousse L, Wu JHY, Siscovick DS, Uitterlinden
AG, Arnett DK, Ferrucci L, Fornage M, Tsai MY, Mozaffarian D, Steffen
LM (2011)
Genetic Loci Associated with Plasma Phospholipid n-3 Fatty Acids: A
Meta-Analysis of Genome-Wide Association Studies from the CHARGE
Consortium.
PLoS Genetics 7(7): e1002193
[Full Text |
PDF]
- Chang RL, Ghamsari L, Manichaikul A, Hom EF, Balaji S, Fu
W, Shen Y, Hao T, Palsson BØ, Salehi-Ashtiani K, Papin JA (2011)
Metabolic network reconstruction of Chlamydomonas offers insight into
light-driven algal metabolism.
Mol Syst Biol 7:518
[Pubmed |
Full Text |
PDF]
2010
- Manichaikul A, Mychaleckyj J, Rich SS, Daly K, Sale M, Chen WM (2010)
Robust relationship inference in genome wide association
studies. Bioinformatics
26:2867-73 [Pubmed |
Full Text | PDF]
- King KA, Choi BY, Zalewski C, Madeo AC, Manichaikul A,
Pryor SP, Ferruggiaro A, Eisenman D, Kim HJ, Niparko J, Thomsen J,
Butman JA, Griffith AJ, Brewer CC (2010) SLC26A4 genotype, but not cochlear
radiologic structure, is correlated with hearing loss in ears with an
Enlarged vestibular aqueduct.
The
Laryngoscope 120: 384-9 [Pubmed | Full Text | PDF]
2009
- Stadnisky MD, Manichaikul A, Lundgren AG, Brown MG (2009)
NK gene complex and chromosome 19 loci enhance MHC resistance to murine cytomegalovirus infection.
Immunogenetics 61:755-64.
[Pubmed | Full
Text | PDF]
- Shavit JA, Manichaikul A, Lemmerhirt HL, Broman KW,
Ginsburg D (2009) Modifiers of von Willebrand factor identified by natural
variation in inbred strains of mice.
Blood 114:5368-74
[Pubmed | Full
Text | PDF]
- Chen WM, Manichaikul A, Rich SS (2009) A generalized
family-based association test for dichotomized traits.
Am J Hum Genet 85:364-76
[Pubmed
| Full
Text | PDF]
- Madeo AC, Manichaikul A, Reynolds JC, Sarlis NJ, Pryor SP,
Shawker TH, Griffith AJ (2009) Evaluation of the thyroid in patients with
hearing loss and enlarged vestibular aqueducts.
Arch Otolaryngol Head Neck Surg 135: 670-6
[Pubmed | Full Text | PDF]
- Manichaikul A, Ghamsari L, Hom EFY, Lin C, Murray RR,
Chang RL, Balaji S, Hao T, Shen Y, Chavail AK, Thiele I, Yang X, Fan
C, Mello E, Hill DE, Vidal M, Salehi-Ashtiani K, Papin JA (2009) Metabolic network analysis
integrated with transcript verification for sequenced genomes.
Nat Methods 6:589-92
[Pubmed | Full Text | PDF]
- Fushan AA, Simons CT, Slack JP, Manichaikul A, Drayna D (2009)
Allelic polymorphism within the TAS1R3 promoter is associated with
human taste sensitivity to sucrose. Current Biology 19:1288-93
[Pubmed
| Full Text | PDF]
- Manichaikul A, Broman KW (2009) Binary trait mapping in
experimental crosses with selective genotyping. Genetics 182: 863-74
[Pubmed
| Full Text | PDF]
- Madeo AC, Manichaikul A, Pryor S, Griffith A (2009)
Do mutations of the Pendred syndrome gene, SLC26A4, confer resistance
to asthma and hypertension?
J Med Genet 46: 405-6
[Pubmed
| Full Text | PDF]
- Manichaikul A, Moon JY, Sen Ś, Yandell BS, Broman KW (2009)
A model selection approach for the identification of quantitative
trait loci in experimental crosses, allowing epistasis.
Genetics 181: 1077-86
[Pubmed | Full Text | PDF]
2007 and earlier
- Rajagopal SK, Ma Q, Obler D, Shen J, Manichaikul A,
Tomita-Mitchell A, Boardman K, Briggs C, Garg V, Srivastava D,
Goldmuntz E, Broman KW, Benson DW, Smoot LB, Pu, WT (2007)
Spectrum of heart disease associated with murine and human GATA4 mutation.
J Mol Cell Cardiol 43: 677-685
[Pubmed |
Full Text |
PDF]
- Manichaikul A, Palmer AA, Sen Ś, Broman KW (2007)
Significance thresholds for quantitative trait locus mapping under selective genotyping.
Genetics 177: 1963-1966
[Pubmed
| Full Text | PDF]
- Broman KW, Sen Ś, Owens SE, Manichaikul A, Southard-Smith EM, Churchill GA (2006)
The X chromosome in quantitative trait locus mapping.
Genetics 174: 2151-2158
[Pubmed | Full Text | PDF]
- Manichaikul A, Dupuis J, Sen Ś, Broman KW (2006)
Poor performance of bootstrap confidence intervals for the location of a quantitative trait locus.
Genetics 174: 481-489
[Pubmed | Full Text | PDF]
- Drayna D, Manichaikul A, de Lange M, Snieder H, Spector T (2001)
Genetic correlates of musical pitch recognition in humans.
Science 291: 1969-1972
[Pubmed
| Full Text | PDF]
Technical Reports and Proceedings
- Manichaikul A, Moon JY, Sen Ś, Yandell BS, Broman KW
(2008)
A model selection approach for the identification of quantitative trait loci in experimental crosses,
allowing epistasis. Technical report #205, Department of
Biostatistics & Medical Informatics, University of
Wisconsin-Madison [Abstract
| PDF]
- Manichaikul A, Johnson K, Man M (2005)
Comparison of statistical methods for studying complex diseases in whole genome pharmacogenetic datasets,
2005 Proceedings of the American Statistical Association, Biopharmaceutical Section.